Stem-loop sequence mml-mir-889

Accession MI0007923
Description Macaca mulatta miR-889 stem-loop
Gene family MIPF0000514; mir-889
Stem-loop
   --     u   g     c      uagua     -  uau 
5'   gugcu aaa aaugg uguccg     ugguc uc   a
     ||||| ||| ||||| ||||||     ||||| ||   u
3'   uauga uuu uuacc acaggc     auuag ag   u
   cc     u   g     a      -uaua     u  uau 
Get sequence
Deep sequencing
32125 reads, 519 reads per million, 8 experiments
Confidence
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Genome context
Coordinates (CR_1.0) Overlapping transcripts
chr7: 164946308-164946386 [+]
intergenic
Clustered miRNAs
< 10kb from mml-mir-889
mml-mir-376c chr7: 164938114-164938179 [+]
mml-mir-376a-2 chr7: 164938492-164938571 [+]
mml-mir-654 chr7: 164938642-164938722 [+]
mml-mir-376b chr7: 164938859-164938958 [+]
mml-mir-376a-1 chr7: 164939205-164939272 [+]
mml-mir-1185-2 chr7: 164941410-164941468 [+]
mml-mir-1185-1 chr7: 164942609-164942718 [+]
mml-mir-381 chr7: 164944340-164944414 [+]
mml-mir-487b chr7: 164944875-164944958 [+]
mml-mir-539 chr7: 164945731-164945808 [+]
mml-mir-889 chr7: 164946308-164946386 [+]
mml-mir-544 chr7: 164947069-164947159 [+]
mml-mir-487a chr7: 164950883-164950962 [+]
mml-mir-382 chr7: 164952738-164952813 [+]
mml-mir-134 chr7: 164953119-164953191 [+]
mml-mir-668 chr7: 164953688-164953753 [+]
mml-mir-485 chr7: 164953852-164953924 [+]
mml-mir-323b chr7: 164954659-164954715 [+]
Database links

Mature sequence mml-miR-889-5p

Accession MIMAT0026912
Sequence

11 - 

aauggcuguccguaguaugguc

 - 32

Get sequence
Evidence experimental; Illumina [2]

Mature sequence mml-miR-889-3p

Accession MIMAT0006528
Sequence

49 - 

uuaauaucggacaaccauugu

 - 69

Get sequence
Deep sequencing 151 reads, 6 experiments
Evidence experimental; Illumina [2]
Predicted targets

References

1
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).