Stem-loop sequence mml-mir-642

Accession

MI0007885 (change log)

Description

Macaca mulatta miR-642 stem-loop

Gene family

MIPF0000468; mir-642

Stem-loop

   --au     c       g                      ggu 
5'     cugag ugggagg ucccucuccaaaugugucuugg   g
       ||||| ||||||| ||||||||||||||||||||||   g
3'     ggcuc acccucc agggagagguuuacacagaacu   g
   cucc     a       a                      agg 

Deep sequencing

1 reads, 0 reads per million, 1 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Mmul_8.0.1; GCA_000772875.3): chr19: 41017617-41017703 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR642
• miRBase Tracker:MI0007885

Mature sequence mml-miR-642

• Accession: MIMAT0006483
• Sequence: 16 - gucccucuccaaaugugucuug - 37
• Deep sequencing: 1 reads, 1 experiments
• Evidence: by similarity; MI0003657
• Predicted targets:
  • TargetScanVert:mml-miR-642

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).