Stem-loop sequence mml-mir-642

Accession

MI0007885

Description

Macaca mulatta miR-642 stem-loop

Gene family

MIPF0000468; mir-642

Stem-loop

   --au     c       g                      ggu 
5'     cugag ugggagg ucccucuccaaaugugucuugg   g
       ||||| ||||||| ||||||||||||||||||||||   g
3'     ggcuc acccucc agggagagguuuacacagaacu   g
   cucc     a       a                      agg 

Deep sequencing

31 reads, 1.55 reads per million, 8 experiments

Confidence

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (CR_1.0): chr19: 51738740-51738826 [+]
• Overlapping transcripts:

  intergenic

Database links

• MIRBASE-TRACKER:MI0007885
• ENTREZGENE: 100315425;MIR642

Mature sequence mml-miR-642

• Accession: MIMAT0006483
• Sequence: 16 - gucccucuccaaaugugucuug - 37
• Evidence: by similarity; MI0003657
• Predicted targets:
  • TARGETSCAN-VERT:mml-miR-642

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).