Stem-loop sequence mml-mir-558

Accession

MI0007834

Description

Macaca mulatta miR-558 stem-loop

Gene family

MIPF0000538; mir-558

Stem-loop

gugugugu   u       uu        c          ua  cu     
        gug guuugug  uauuuugg auaguagcuc  ga  cuau 
        ||| |||||||  |||||||| ||||||||||  ||  ||| u
        cgu caaacac  auaaaacc ugucgucgag  cu  gaua 
-----guc   -       -c        a          uc  uu     

Genome context

• Coordinates (MMUL1.0): 13: 32556562-32556655 [+]
• Overlapping transcripts:

  sense

  ENSMMUT00000013093 ; intron 28

  ENSMMUT00000013093 ; intron 28

  ENSMMUT00000013093 ; intron 28

  ENSMMUT00000013092 ; intron 75

  ENSMMUT00000013092 ; intron 75

  ENSMMUT00000013092 ; intron 75

Database links

• ENTREZGENE: 100315310;MIR558

Mature sequence mml-miR-558

• Accession: MIMAT0006427
• Sequence: 61 - ugagcugcuguaccaaaau - 79
• Evidence: by similarity; MI0003564
• Predicted targets:
  • TARGETSCAN-VERT:mml-miR-558

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).