Stem-loop sequence mml-mir-550

Accession

MI0007826

Description

Macaca mulatta miR-550 stem-loop

Gene family

MIPF0000334; mir-550

Stem-loop

ugaugcuuu   g     u ca               a ag c     gu 
         gcu gcugg g  gugccugagggagua g  c cuguu  u
         ||| ||||| |  ||||||||||||||| |  | |||||  g
         uga cgacc c  cacggacucccucau c  g gauag  u
---------   a     u ua               - cu u     aa 

Genome context

• Coordinates (MMUL1.0): 3: 95919861-95919953 [-]
• Overlapping transcripts:

  sense

  ENSMMUT00000017586 ; intron 1

  ENSMMUT00000017586 ; intron 1

  ENSMMUT00000017586 ; intron 1

  ENSMMUT00000017584 ; intron 2

  ENSMMUT00000017584 ; intron 2

  ENSMMUT00000017584 ; intron 2

Database links

• ENTREZGENE: 100315306;MIR550

Mature sequence mml-miR-550

• Accession: MIMAT0006418
• Sequence: 22 - agugccugagggaguaagagccc - 44
• Evidence: by similarity; MI0003600
• Predicted targets:
  • TARGETSCAN-VERT:mml-miR-550

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).