Stem-loop sequence mml-mir-548b

Accession

MI0007820

Description

Macaca mulatta miR-548b stem-loop

Gene family

MIPF0000317; mir-548

Stem-loop

caggcuau     u       ug               c  gg   uuuau 
        guauu agguugg  caaaaguaauugggg uu  gcc     u
        ||||| |||||||  ||||||||||||||| ||  |||      
        cauaa uccaacc  guuuucguuaacucc aa  cgg     u
------uu     -       gu               a  aa   uaacu 

Genome context

• Coordinates (MMUL1.0): 4: 144912371-144912467 [+]
• Overlapping transcripts:

  sense

  ENSMMUT00000018677 ; intron 1

  ENSMMUT00000018676 ; intron 1

  ENSMMUT00000018674 ; intron 1

  ENSMMUT00000039998 ; intron 1

  ENSMMUT00000018677 ; intron 1

  ENSMMUT00000018676 ; intron 1

  ENSMMUT00000018674 ; intron 1

  ENSMMUT00000039998 ; intron 1

  ENSMMUT00000018677 ; intron 1

  ENSMMUT00000018676 ; intron 1

  ENSMMUT00000018674 ; intron 1

  ENSMMUT00000039998 ; intron 1

Database links

• ENTREZGENE: 100315302;MIR548B

Mature sequence mml-miR-548b

• Accession: MIMAT0006411
• Sequence: 61 - caaaaaccucaauugcuuuugu - 82
• Evidence: by similarity; MI0003596
• Predicted targets:
  • TARGETSCAN-VERT:mml-miR-548b

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).