Stem-loop sequence mml-mir-539

Accession MI0007815
Description Macaca mulatta miR-539 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
     ug          a      g    -    - uuu 
auacu  aggagaaauu uccuug ugug uucg c   a
|||||  |||||||||| |||||| |||| |||| |   u
uauga  uuuucuuuaa aggaac auac aagu g   u
     gu          c      -    u    a uau
Get sequence
Genome context
Coordinates (MMUL1.0) Overlapping transcripts
7: 164331808-164331885 [+]
intergenic
Clustered miRNAs
< 10kb from mml-mir-539
mml-mir-376c 7: 164324189-164324254 [+]
mml-mir-376a-2 7: 164324567-164324646 [+]
mml-mir-654 7: 164324717-164324797 [+]
mml-mir-376b 7: 164324934-164325033 [+]
mml-mir-376a-1 7: 164325280-164325347 [+]
mml-mir-1185 7: 164328686-164328795 [+]
mml-mir-381 7: 164330417-164330491 [+]
mml-mir-487b 7: 164330952-164331035 [+]
mml-mir-539 7: 164331808-164331885 [+]
mml-mir-889 7: 164332385-164332463 [+]
mml-mir-544 7: 164333144-164333234 [+]
mml-mir-487a 7: 164336378-164336457 [+]
mml-mir-382 7: 164338233-164338308 [+]
mml-mir-134 7: 164338614-164338686 [+]
mml-mir-668 7: 164339183-164339248 [+]
mml-mir-485 7: 164339347-164339419 [+]
mml-mir-453 7: 164340111-164340190 [+]
Database links
  • ENTREZGENE: 100315300;MIR539

Mature sequence mml-miR-539

Accession MIMAT0006405
Sequence

9 -  

ggagaaauuauccuuggugugu

 - 30

Get sequence
Evidence by similarity; MI0003514
Predicted targets

References

1
PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).