Stem-loop sequence mml-mir-501

Accession MI0007775
Description Macaca mulatta miR-501 stem-loop
Gene family MIPF0000139; mir-500
Stem-loop
       u       -u       uguc        ag g   uuu 
5' gcuc uccucuc  aauccuu    ccugggug  a ugc   c
   |||| |||||||  |||||||    ||||||||  | |||   u
3' cgag gggagag  uuaggaa    ggacccac  u acg   g
       u       uc       ---c        -g g   uaa 
Get sequence
Deep sequencing
186 reads, 9.4 reads per million, 8 experiments
Confidence
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (CR_1.0) Overlapping transcripts
JH290886.1: 39956-40039 [+]
intergenic
Clustered miRNAs
< 10kb from mml-mir-501
mml-mir-532 JH290886.1: 33403-33480 [+]
mml-mir-188 JH290886.1: 33761-33846 [+]
mml-mir-500a JH290886.1: 38665-38748 [+]
mml-mir-362 JH290886.1: 39196-39260 [+]
mml-mir-501 JH290886.1: 39956-40039 [+]
mml-mir-500b JH290886.1: 42676-42736 [+]
mml-mir-660 JH290886.1: 45211-45307 [+]
mml-mir-502 JH290886.1: 46570-46649 [+]
Database links

Mature sequence mml-miR-501-5p

Accession MIMAT0006364
Sequence

14 - 

aauccuuugucccugggugaga

 - 35

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Illumina [2]
Predicted targets

Mature sequence mml-miR-501-3p

Accession MIMAT0026889
Sequence

54 - 

gcacccaggcaaggauucu

 - 72

Get sequence
Evidence experimental; Illumina [2]

References

1
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).