Stem-loop sequence mml-mir-143

AccessionMI0007632
DescriptionMacaca mulatta miR-143 stem-loop
Gene family MIPF0000094; mir-143
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled Mir-143. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

In molecular biology mir-143 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by a several mechanisms. mir–143 is highly conserved in vertebrates. mir-143 is thought be involved in cardiac morphogenesis but has also been implicated in cancer.

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Stem-loop
-gc    c  cgug    c ag      g         g      u  -  ag 
   gcag gc    ucuc c  ccugag ugcagugcu caucuc gg uc  u
   |||| ||    |||| |  |||||| ||||||||| |||||| || ||   
   cguc ug    agag g  ggacuc augucacga guagag cu ag  u
cga    u  uuga    a aa      g         a      u  g  gg 
Get sequence
Deep sequencing
696257 reads, 2.16e+04 reads per million, 8 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (CR_1.0) Overlapping transcripts
chr6: 147499981-147500086 [+]
antisense
ENSMMUT00000029603 ; TNIP1-203; intron 1
Clustered miRNAs
< 10kb from mml-mir-143
mml-mir-143chr6: 147499981-147500086 [+]
mml-mir-145chr6: 147501690-147501777 [+]
Database links

Mature sequence mml-miR-143-5p

Accession MIMAT0026823
Sequence

28 - 

gugcagugcugcaucucugg

 - 47

Get sequence
Deep sequencing9 reads, 5 experiments
Evidence experimental; Illumina [2]

Mature sequence mml-miR-143-3p

Accession MIMAT0006201
Sequence

61 - 

ugagaugaagcacuguagcuc

 - 81

Get sequence
Deep sequencing13254 reads, 8 experiments
Evidence experimental; Illumina [2]
Predicted targets

References

1
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).