Stem-loop sequence hsa-mir-1539

Accession

MI0007260

Symbol

HGNC:MIR1539

Description

Homo sapiens miR-1539 stem-loop

Stem-loop

-   -    c   c      uagc  g 
 ggc ucug ggc ugcagg    gc a
 ||| |||| ||| ||||||    ||  
 ccg agac cug gcgucc    ug a
c   u    c   c      ----  a 

Genome context

• Coordinates (GRCh37.p5): chr18: 47013743-47013792 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000447660 ; MIR1539-001; exon 1

  ENST00000581232 ; hsa-mir-1539.1-001; exon 1

  antisense

  OTTHUMT00000447657 ; RP11-110H1.2-001; intron 5

  OTTHUMT00000447658 ; RP11-110H1.2-002; intron 6

  ENST00000584895 ; RP11-110H1.2-001; intron 5

  ENST00000577910 ; RP11-110H1.2-002; intron 6

Database links

• ENTREZGENE: 100302257;MIR1539
• HGNC: 35383;MIR1539

Mature sequence hsa-miR-1539

• Accession: MIMAT0007401
• Sequence: 30 - uccugcgcgucccagaugccc - 50
• Evidence: experimental; ChIP-seq [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1539
  • MICRORNA.ORG:hsa-miR-1539
  • MIRDB:hsa-miR-1539
  • RNA22-HSA:hsa-miR-1539
  • TARGETMINER:hsa-miR-1539

References

1. PMID:18524951 "Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing" Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC Proc Natl Acad Sci U S A. 105:7964-7969(2008).