Stem-loop sequence ptc-MIR530b

Accession MI0007036
Description Populus trichocarpa miR530b stem-loop
Gene family MIPF0000521; MIR530
Stem-loop 
     u   uu  c                          uu  guuuguuuuguuuuugacuccacaaacaaaaucaaguucugu 
gccaa aug  gc uuuaucugcauuugcaccugcaucuu  gc                                          c
||||| |||  || ||||||||||||||||||||||||||  ||                                          g
ugguu uac  cg aaguggacgugaacguggacguggag  ug                                          a
     u   --  u                          -u  auucgaauaaucaaagguauagauuaacaggguguaugacau
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Genome context
Coordinates (JGI_Poptr2.0) Overlapping transcripts
scaffold_4: 21356028-21356199 [+]
intergenic

Mature sequence ptc-miR530b

Accession MIMAT0005998
Sequence

21 -  

ugcauuugcaccugcaucuu

 - 40

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Evidence experimental; cloned [1]

References

1
PMID:18363789 "Stress-responsive microRNAs in Populus" Lu S, Sun YH, Chiang VL Plant J. 55:131-151(2008).