Stem-loop sequence oan-mir-1419b-2

Accession MI0006998
Description Ornithorhynchus anatinus miR-1419b-2 stem-loop
Gene family MIPF0000570; mir-1419
Stem-loop 
-ca     -   acag   -  u u   aca          a    u      ---    u 
   uccug ggc    uga gg g cau   cagugcuggg gaug uaucac   guga a
   ||||| |||    ||| || | |||   |||||||||| |||| ||||||   ||||  
   agggc ucg    acu cc c gua   gucacgaccc cugc auagug   uacu u
gaa     g   -aga   a  - -   aac          a    u      gcu    u
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Genome context
Coordinates (OANA5) Overlapping transcripts
X1: 44286185-44286299 [-]
antisense
ENSOANT00000030955 ; F6S1K5_ORNAN; intron 2
Clustered miRNAs
< 10kb from oan-mir-1419b-2
oan-mir-1421ag-1 X1: 44295490-44295574 [-]
oan-mir-1421y-2 X1: 44294920-44295029 [-]
oan-mir-1421ab-2 X1: 44293810-44293911 [-]
oan-mir-1421aa X1: 44291691-44291783 [-]
oan-mir-1419c-1 X1: 44291006-44291114 [-]
oan-mir-1421z X1: 44289986-44290072 [-]
oan-mir-1419b-2 X1: 44286185-44286299 [-]
oan-mir-1421y-1 X1: 44284866-44284978 [-]
oan-mir-1421x X1: 44284340-44284425 [-]
oan-mir-1419b-1 X1: 44283634-44283744 [-]
oan-mir-1421w X1: 44282896-44282986 [-]
oan-mir-1421v X1: 44282335-44282426 [-]
Database links

Mature sequence oan-miR-1419b-5p

Accession MIMAT0007240
Previous IDs oan-miR-1419b
Sequence

30 -  

agugcugggagauguuaucacg

 - 51

Get sequence
Evidence experimental; Solexa [1]

Mature sequence oan-miR-1419b-2-3p

Accession MIMAT0009174
Previous IDs oan-miR-1419b-2*
Sequence

67 -  

ugauaucgucacccagcacugc

 - 88

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).