Stem-loop sequence osa-MIR444e

Accession MI0006977
Description Oryza sativa miR444e stem-loop
Gene family MIPF0000402; MIR444
Stem-loop 
     u    c        a      a      c                 -a    c ug    -au a 
gguuu guaa caggggca uaagcu gaggca caacugcauaacuugcg  gaaa u  uugg   g u
||||| |||| |||||||| |||||| |||||| |||||||||||||||||  |||| |  ||||   | g
ccaaa cguu guuuccgu auucga cuccgu guugacguauugaacgc  uuuu a  aacc   c a
     u    u        c      a      c                 cg    - gu    guu u
Get sequence
Deep sequencing
3456 reads, 4 experiments

Mature sequence osa-miR444e

Accession MIMAT0005975
Sequence

99 -  

ugcaguugcugccucaagcuu

 - 119

Get sequence
Deep sequencing 2727 reads, 4 experiments
Evidence experimental; MPSS [1], Northern [1], cloned [2]

References

1
PMID:18353984 "Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)" Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ Proc Natl Acad Sci U S A. 105:4951-4956(2008).
2
PMID:18312648 "Identification of novel and candidate miRNAs in rice by high throughput sequencing" Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK BMC Plant Biol. 8:25(2008).