Stem-loop sequence oan-mir-1421ae

Accession MI0006948
Description Ornithorhynchus anatinus miR-1421ae stem-loop
Gene family MIPF0000564; mir-1421
Stem-loop 
  uu  cc              aac         a            aua 
ag  ga  uacgguauggugug   agguuauau uggugcagugug   g
||  ||  ||||||||||||||   ||||||||| ||||||||||||   u
uc  cu  gugucgugccacau   uccaaugua acuacgucauau   g
  cu  cu              ccc         c            aag
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Genome context
Coordinates (OANA5) Overlapping transcripts
X1: 44316162-44316264 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-1421ae
oan-mir-1421ah X1: 44321166-44321259 [-]
oan-mir-1421af X1: 44318896-44318990 [-]
oan-mir-1419e X1: 44317624-44317710 [-]
oan-mir-1421ae X1: 44316162-44316264 [-]
oan-mir-1421ad X1: 44314924-44315009 [-]
oan-mir-1421aj X1: 44314342-44314472 [-]
oan-mir-1421ac-1 X1: 44311290-44311413 [-]
oan-mir-1421ac-2 X1: 44308437-44308523 [-]
oan-mir-1414 X1: 44306726-44306812 [-]
Database links

Mature sequence oan-miR-1421ae

Accession MIMAT0007261
Sequence

23 -  

aacagguuauauauggugcagu

 - 44

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Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).