Stem-loop sequence oan-mir-449b

Accession MI0006792
Description Ornithorhynchus anatinus miR-449b stem-loop
Gene family MIPF0000133; mir-449
Stem-loop 
    ca ua     -gu     a     u      uuugc        uu   u 
guga  u  ccugg   caagu ggcag gugaug     uggcugcu  gaa c
||||  |  |||||   ||||| ||||| ||||||     ||||||||  |||  
uacu  g  ggauc   guuca ccguc cauugc     accgacga  cuu g
    ca gc     auc     -     u      ----c        --   a
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Genome context
Coordinates (OANA5) Overlapping transcripts
Contig3432: 5779-5880 [+]
intergenic
Contig39133: 803-904 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-449b
oan-mir-449c Contig3432: 4405-4521 [+]
oan-mir-449b Contig3432: 5779-5880 [+]
oan-mir-449a Contig3432: 5911-6025 [+]
Database links

Mature sequence oan-miR-449b-5p

Accession MIMAT0007013
Previous IDs oan-miR-449b
Sequence

22 -  

aggcagugugauguuugcugg

 - 42

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Evidence experimental; Solexa [1]

Mature sequence oan-miR-449b-3p

Accession MIMAT0007014
Previous IDs oan-miR-449b*
Sequence

62 -  

cagccaccguuacucugccacu

 - 83

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).