Stem-loop sequence oan-mir-1421c

Accession MI0006764
Description Ornithorhynchus anatinus miR-1421c stem-loop
Gene family MIPF0000564; mir-1421
Stem-loop 
ga   g       u          c          -gg a 
  cac gugugag agguuacaug ggugcaguau   c g
  ||| ||||||| |||||||||| ||||||||||   |  
  gug cacauuc uccagugugc cuacgucgua   g u
cc   a       c          c          aaa g
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Genome context
Coordinates (OANA5) Overlapping transcripts
Contig22847: 2828-2908 [-]
intergenic
Clustered miRNAs
< 10kb from oan-mir-1421c
oan-mir-1421j Contig22847: 9647-9760 [-]
oan-mir-1421i-1 Contig22847: 9450-9510 [-]
oan-mir-1421h Contig22847: 6874-6963 [-]
oan-mir-1421g-1 Contig22847: 6129-6240 [-]
oan-mir-1419g Contig22847: 5741-5822 [-]
oan-mir-1421f Contig22847: 5019-5107 [-]
oan-mir-1421e Contig22847: 3936-4040 [-]
oan-mir-1421d Contig22847: 3447-3563 [-]
oan-mir-1421c Contig22847: 2828-2908 [-]
oan-mir-1419f Contig22847: 2420-2526 [-]
oan-mir-1421b Contig22847: 1681-1759 [-]
oan-mir-1421a Contig22847: 75-167 [-]
Database links

Mature sequence oan-miR-1421c-5p

Accession MIMAT0006967
Previous IDs oan-miR-1421c
Sequence

14 -  

uagguuacaugcggugcaguau

 - 35

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Evidence experimental; Solexa [1]

Mature sequence oan-miR-1421c-3p

Accession MIMAT0006968
Previous IDs oan-miR-1421c*
Sequence

49 -  

gcugcaucccgugugaccucc

 - 69

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:18463306 "Conservation of small RNA pathways in platypus" Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ Genome Res. 18:995-1004(2008).