Stem-loop sequence hsa-mir-513c

Accession

MI0006649

Symbol

HGNC:MIR513C

Description

Homo sapiens miR-513c stem-loop

Gene family

MIPF0000130; mir-506

Stem-loop

-  -     g   c       ag      uc        gaa 
 gc guaca ugc uuucuca  gaggug  guuuaugu   c
 || ||||| ||| |||||||  ||||||  ||||||||    
 cg caugu aug gaagagu  uuccac  uaaauaua   u
a  a     a   a       cu      uu        aaa 

Deep sequencing

1220 reads, 11 experiments

Genome context

• Coordinates (GRCh37.p5): chrX: 146271222-146271305 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-513c

• hsa-mir-513b: chrX: 146280562-146280645 [-]
• hsa-mir-513c: chrX: 146271222-146271305 [-]

Database links

• ENTREZGENE: 100302114;MIR513C
• ENTREZGENE: 100313804;MIR513C
• HGNC: 33934;MIR513C

Mature sequence hsa-miR-513c-5p

• Accession: MIMAT0005789
• Previous IDs: hsa-miR-513c
• Sequence: 14 - uucucaaggaggugucguuuau - 35
• Deep sequencing: 801 reads, 11 experiments
• Evidence: by similarity; MI0003191
• Predicted targets:
  • DIANA-MICROT:hsa-miR-513c-5p
  • MICRORNA.ORG:hsa-miR-513c-5p
  • MIRDB:hsa-miR-513c-5p
  • RNA22-HSA:hsa-miR-513c-5p
  • TARGETMINER:hsa-miR-513c-5p
  • TARGETSCAN-VERT:hsa-miR-513c

Mature sequence hsa-miR-513c-3p

• Accession: MIMAT0022728
• Sequence: 49 - uaaauuucaccuuucugagaaga - 71
• Deep sequencing: 419 reads, 6 experiments
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-513c-3p
  • MIRDB:hsa-miR-513c-3p
  • TARGETMINER:hsa-miR-513c-3p

References

1. PMID:17416744 "Rapid evolution of an X-linked microRNA cluster in primates" Zhang R, Peng Y, Wang W, Su B Genome Res. 17:612-617(2007).