Stem-loop sequence bna-MIR166b

Accession

MI0006475 (change log)

Description

Brassica napus miR166b stem-loop

Gene family

MIPF0000004; MIR166

Literature search

10 open access papers mention bna-MIR166b
(32 sentences)

Stem-loop

        c   u      u      cu   g c   --------   a   g     ug g  g 
5' aaguu agg ggauga gcuugg  cga a cau        uca uau aucau  u au a
   ||||| ||| |||||| ||||||  ||| | |||        ||| ||| |||||  | ||  
3' uucaa ucc cuuacu cggacc  gcu u gua        agu aua uagua  a ua u
        c   c      u      ag   g a   auaguaau   a   g     gu g  g 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (BrassicaDB-20080411)	Overlapping transcripts
EM:BH423978: 306-423 [+]	intergenic
EM:BH680789: 165-282 [-]	intergenic

Database links

• miRBase Tracker:MI0006475

Mature sequence bna-miR166b

• Accession: MIMAT0005630
• Sequence: 91 - ucggaccaggcuucauucccc - 111
• Evidence: experimental; cloned [1]

References

1. PMID:17659282 "Cloning and characterization of microRNAs from Brassica napus" Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL FEBS Lett. 581:3848-3856(2007).