Stem-loop sequence bna-MIR167c

Accession MI0006473
Description Brassica napus miR167c stem-loop
Gene family MIPF0000023; MIR167_1
Stem-loop 
     ac   -  u u a         c             ua  -     uu ---         ua 
ggugc  cgg ca c g ugaagcugc agcaugaucuagu  ac uuuau  c   uccguuguu  u
|||||  ||| || | | ||||||||| |||||||||||||  || |||||  |   |||||||||  c
cuacg  guc gu g c acuuugaug uuguacuagauua  ug gaaua  g   agguaacag  c
     cu   a  u c c         c             gc  u     gg aaa         ua
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Genome context
Coordinates (BrassicaDB-20080411) Overlapping transcripts
EM:AC189327: 100866-100999 [+]
intergenic
EM:DX037998: 153-286 [-]
intergenic
EM:EV043346: 100-233 [+]
intergenic
EM:EV055825: 89-222 [+]
intergenic

Mature sequence bna-miR167c

Accession MIMAT0005628
Sequence

18 -  

ugaagcugccagcaugaucua

 - 38

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Evidence experimental; cloned [1], Solexa [2]

References

1
PMID:17659282 "Cloning and characterization of microRNAs from Brassica napus" Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL FEBS Lett. 581:3848-3856(2007).
2
PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).