Stem-loop sequence bna-MIR169h

Accession

MI0006464 (change log)

Description

Brassica napus miR169h stem-loop

Gene family

MIPF0000012; MIR169_1

Literature search

11 open access papers mention bna-MIR169h
(43 sentences)

Stem-loop

           g   c    --    u     g    g   -     a    u    u      gucuua     ua  u   a       aaa 
5' gagaaaug uga auga  agaa gagaa uugu ugg uagcc agga gacu gccugc      gacca  uc auc aagacua   g
   |||||||| ||| ||||  |||| ||||| |||| ||| ||||| |||| |||| ||||||      |||||  || ||| |||||||   a
3' cucuuuac acu uacu  ucuu cucuu gaca acu aucgg uccu cuga cggaug      uuggu  ag uag uucugau   u
           -   u    cc    u     -    g   u     c    -    -      -gcuaa     ua  -   c       agu 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (BrassicaDB-20080411)	Overlapping transcripts
EM:BZ062541: 101-276 [+]	intergenic
EM:CC954204: 39-214 [+]	intergenic

Database links

• miRBase Tracker:MI0006464

Mature sequence bna-miR169h

• Accession: MIMAT0005619
• Sequence: 37 - uagccaaggaugacuugccugc - 58
• Evidence: experimental; cloned [1]

References

1. PMID:17659282 "Cloning and characterization of microRNAs from Brassica napus" Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL FEBS Lett. 581:3848-3856(2007).