Stem-loop sequence hsa-mir-1306

Accession MI0006443
Symbol HGNC:MIR1306
Description Homo sapiens miR-1306 stem-loop
Gene family MIPF0000531; mir-1306
Stem-loop 
g  ag a    -c       uccccu  a        gugg   a 
 ug  c gucu  caccacc      gc aacgucca    ugc g
 ||  | ||||  |||||||      || ||||||||    |||  
 gc  g cagg  guggugg      cg uugcaggu    aug a
a  cu a    ua       ---ucu  g        ---a   g
Get sequence
Deep sequencing
520 reads, 33 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr22: 20073581-20073665 [+]
sense
OTTHUMT00000318655 ; DGCR8-002; exon 1
OTTHUMT00000318656 ; DGCR8-003; 3'UTR (exon 1)
OTTHUMT00000318655 ; DGCR8-002; exon 1
OTTHUMT00000318656 ; DGCR8-003; 3'UTR (exon 1)
OTTHUMT00000318655 ; DGCR8-002; exon 1
OTTHUMT00000318656 ; DGCR8-003; 3'UTR (exon 1)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
ENST00000495826 ; DGCR8-002; exon 1
ENST00000407755 ; DGCR8-003; 3'UTR (exon 1)
ENST00000495826 ; DGCR8-002; exon 1
ENST00000407755 ; DGCR8-003; 3'UTR (exon 1)
ENST00000495826 ; DGCR8-002; exon 1
ENST00000407755 ; DGCR8-003; 3'UTR (exon 1)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
Clustered miRNAs
< 10kb from hsa-mir-1306
hsa-mir-3618 chr22: 20073269-20073356 [+]
hsa-mir-1306 chr22: 20073581-20073665 [+]
Database links

Mature sequence hsa-miR-1306-5p

Accession MIMAT0022726
Sequence

15 -  

ccaccuccccugcaaacgucca

 - 36

Get sequence
Deep sequencing 230 reads, 24 experiments
Evidence not experimental
Predicted targets

Mature sequence hsa-miR-1306-3p

Accession MIMAT0005950
Previous IDs hsa-miR-1306
Sequence

55 -  

acguuggcucugguggug

 - 72

Get sequence
Deep sequencing 289 reads, 20 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).