Stem-loop sequence bna-MIR824

AccessionMI0006440 (change log)
DescriptionBrassica napus miR824 stem-loop
Gene family MIPF0000442; MIR824
Literature search

5 open access papers mention bna-MIR824
(15 sentences)

Stem-loop
       -----    ug    u               u             -uuuuguuu     guuca          aaucuguagugaguauuaaggaaaauagcuuguucaacauaucacacuacucuuuuagaaacaaaacuauauuuuagaugcuuuuccagcuugauauacguuguuuuguuauguauaccuguauucucccggcuaccaaaacguuaagaaauaaggugaacaucuccccaaaaccugcauccaauuagaaaggucuaggucacagccauuacuugcuaucucucgauuaagcuauuuuauu 
5' ccuc     gagu  ucuu caugucuagaccauu gugagaagggauu         gcacc     ccccacucuc                                                                                                                                                                                                                                                 u
   ||||     ||||  |||| ||||||||||||||| |||||||||||||         |||||     ||||||||||                                                                                                                                                                                                                                                 c
3' ggag     cuca  ggag guguagaucugguag uacucuucccuga         cgugg     ggggugaggg                                                                                                                                                                                                                                                 u
       uuacu    gu    c               c             uuauugggu     ---aa          guucaauaaaugauacuucauuugaucacaucgauucaucacguucuaaguucaagaaucgauaguacuuuauggagauugugaggucugucuccaaacuguagagcauccuuuuuacagacaggcuucacaccguaucagguuuuuguuuuauaauacauacgucguaggucuuuacaguacuuaccugaauuacauaaaauaaaauaugaauugaggacuuacuagacuacuacuacua 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (BrassicaDB-20080411) Overlapping transcripts
EM:AC189548: 18638-19269 [+]
intergenic
Database links

Mature sequence bna-miR824

Accession MIMAT0005599
Sequence

22 - 

uagaccauuugugagaaggga

 - 42

Get sequence
Evidence experimental; Northern [1]

References

1
PMID:17704216 "MicroRNA-mediated regulation of stomatal development in Arabidopsis" Kutter C, Schob H, Stadler M, Meins F Jr, Si-Ammour A Plant Cell. 19:2417-2429(2007).