Stem-loop sequence hsa-mir-548n

Accession MI0006399
Symbol HGNC:MIR548N
Description Homo sapiens miR-548n stem-loop
Gene family MIPF0000317; mir-548
Stem-loop 
--                        a      cg u 
  agguuggugcaaaaguaauugugg uuuugu  u a
  |||||||||||||||||||||||| ||||||  | a
  uccaaccacguuuucauuaacgcc aaaacg  a a
aa                        c      au a
Get sequence
Deep sequencing
53 reads, 22 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr7: 34980372-34980446 [-]
sense
OTTHUMT00000337506 ; DPY19L1-001; intron 18
OTTHUMT00000337506 ; DPY19L1-001; intron 18
OTTHUMT00000337506 ; DPY19L1-001; intron 18
ENST00000310974 ; DPY19L1-001; intron 18
ENST00000310974 ; DPY19L1-001; intron 18
ENST00000310974 ; DPY19L1-001; intron 18
Database links

Mature sequence hsa-miR-548n

Accession MIMAT0005916
Sequence

10 -  

caaaaguaauuguggauuuugu

 - 31

Get sequence
Deep sequencing 42 reads, 15 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).