Stem-loop sequence hsa-mir-1250

Accession MI0006385
Symbol HGNC:MIR1250
Description Homo sapiens miR-1250 stem-loop
Gene family MIPF0000696; mir-1250
Stem-loop 
--    -c     ------   -    c    -  -c  u      ---          uugc 
  cugu  ccgcu      ggc cugg aggu ga  gg gcugga   uguggccuuu    c
  ||||  |||||      ||| |||| |||| ||  || ||||||   ||||||||||    u
  gaca  gguga      ccg gacc ucca cu  cc cgaccu   acaccggaaa    u
cg    cc     agucuc   a    u    a  ua  -      uuu          ucuu
Get sequence
Deep sequencing
11 reads, 5 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr17: 79106996-79107108 [-]
sense
OTTHUMT00000256055 ; AATK-001; intron 2
OTTHUMT00000256055 ; AATK-001; intron 2
OTTHUMT00000439038 ; AATK-004; intron 2
OTTHUMT00000256055 ; AATK-001; intron 2
OTTHUMT00000439038 ; AATK-004; intron 2
ENST00000326724 ; AATK-001; intron 2
ENST00000374792 ; AATK-201; intron 2
ENST00000326724 ; AATK-001; intron 2
ENST00000374792 ; AATK-004; intron 2
ENST00000326724 ; AATK-001; intron 2
ENST00000374792 ; AATK-004; intron 2
Clustered miRNAs
< 10kb from hsa-mir-1250
hsa-mir-1250 chr17: 79106996-79107108 [-]
hsa-mir-338 chr17: 79099683-79099749 [-]
hsa-mir-3065 chr17: 79099677-79099755 [+]
hsa-mir-657 chr17: 79099076-79099173 [-]
Database links

Mature sequence hsa-miR-1250

Accession MIMAT0005902
Sequence

24 -  

acggugcuggauguggccuuu

 - 44

Get sequence
Deep sequencing 11 reads, 5 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).