Stem-loop sequence hsa-mir-548f-5

AccessionMI0006378 (change log)
Symbol HGNC:MIR548F5
DescriptionHomo sapiens miR-548f-5 stem-loop
Gene family MIPF0000317; mir-548
Literature search

46 open access papers mention hsa-mir-548f-5
(146 sentences)

Stem-loop
   --          c            c  gu            u 
5'   uauuagguug ugcaaaaguaau au  uuuuuuccauug a
     |||||||||| |||||||||||| ||  ||||||||||||  
3'   auaauccaac auguuuucauua ug  aaaaaggguaau a
   cg          c            a  uc            g 
Get sequence
Deep sequencing
1592 reads, 0.98 reads per million, 102 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chrX: 32641474-32641559 [-]
sense
OTTHUMT00000056191 ; DMD-010; intron 1
OTTHUMT00000056184 ; DMD-003; intron 2
OTTHUMT00000056185 ; DMD-004; intron 2
OTTHUMT00000056186 ; DMD-005; intron 2
OTTHUMT00000056190 ; DMD-009; intron 3
OTTHUMT00000056187 ; DMD-006; intron 11
OTTHUMT00000056182 ; DMD-001; intron 11
OTTHUMT00000056183 ; DMD-002; intron 11
ENST00000480751 ; DMD-010; intron 1
ENST00000488902 ; DMD-003; intron 2
ENST00000420596 ; DMD-004; intron 2
ENST00000448370 ; DMD-005; intron 2
ENST00000447523 ; DMD-009; intron 3
ENST00000378677 ; DMD-006; intron 11
ENST00000357033 ; DMD-001; intron 11
ENST00000288447 ; DMD-002; intron 11
Database links

Mature sequence hsa-miR-548f-3p

Accession MIMAT0005895
Sequence

52 - 

aaaaacuguaauuacuuuu

 - 70

Get sequence
Deep sequencing9577 reads, 124 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).