Stem-loop sequence hsa-mir-548f-4

AccessionMI0006377 (change log)
Symbol HGNC:MIR548F4
DescriptionHomo sapiens miR-548f-4 stem-loop
Gene family MIPF0000317; mir-548
Literature search

46 open access papers mention hsa-mir-548f-4
(146 sentences)

Stem-loop
   ---        acg  uuag    g g          a ug       c     a 
5'    gaguucua   ua    guug u caaaaguaau g  guuuuug cauua a
      ||||||||   ||    |||| | |||||||||| |  ||||||| |||||  
3'    uuuaagau   au    uaac a guuuucauua u  caaaaac guaau a
   gac        --a  --ua    a g          a gu       a     g 
Get sequence
Deep sequencing
6569 reads, 8.97 reads per million, 145 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr7: 147378017-147378121 [-]
antisense
OTTHUMT00000327669 ; CNTNAP2-002; intron 2
OTTHUMT00000327668 ; CNTNAP2-001; intron 13
ENST00000455301 ; CNTNAP2-002; intron 2
ENST00000361727 ; CNTNAP2-001; intron 13
Database links

Mature sequence hsa-miR-548f-3p

Accession MIMAT0005895
Sequence

63 - 

aaaaacuguaauuacuuuu

 - 81

Get sequence
Deep sequencing9577 reads, 124 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).