Stem-loop sequence hsa-mir-548f-4

Accession MI0006377
Symbol HGNC:MIR548F4
Description Homo sapiens miR-548f-4 stem-loop
Gene family MIPF0000317; mir-548
Stem-loop 
---        acg  uuag    g g          a ug       c     a 
   gaguucua   ua    guug u caaaaguaau g  guuuuug cauua a
   ||||||||   ||    |||| | |||||||||| |  ||||||| |||||  
   uuuaagau   au    uaac a guuuucauua u  caaaaac guaau a
gac        --a  --ua    a g          a gu       a     g
Get sequence
Deep sequencing
38 reads, 11 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr7: 147075109-147075213 [-]
antisense
OTTHUMT00000327668 ; CNTNAP2-001; intron 9
OTTHUMT00000327668 ; CNTNAP2-001; intron 9
OTTHUMT00000327668 ; CNTNAP2-001; intron 9
ENST00000361727 ; CNTNAP2-001; intron 9
ENST00000361727 ; CNTNAP2-001; intron 9
ENST00000361727 ; CNTNAP2-001; intron 9
Database links

Mature sequence hsa-miR-548f

Accession MIMAT0005895
Sequence

63 -  

aaaaacuguaauuacuuuu

 - 81

Get sequence
Deep sequencing 76 reads, 9 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).