Stem-loop sequence hsa-mir-548f-2

AccessionMI0006375 (change log)
Symbol HGNC:MIR548F2
DescriptionHomo sapiens miR-548f-2 stem-loop
Gene family MIPF0000317; mir-548
Literature search

46 open access papers mention hsa-mir-548f-2
(146 sentences)

Stem-loop
   uaauaac                 ca              au     c 
5'        uauuagguuggugcgaa  uaauugcaguuuuu  cauua u
          |||||||||||||||||  ||||||||||||||  |||||  
3'        auaauccaaccacguuu  auuaaugucaaaaa  guaau u
   ugauuuu                 uc              cg     u 
Get sequence
Deep sequencing
2370 reads, 2.29 reads per million, 131 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr2: 212426263-212426360 [-]
sense
OTTHUMT00000256597 ; ERBB4-001; intron 20
OTTHUMT00000336976 ; ERBB4-002; intron 20
ENST00000342788 ; ERBB4-001; intron 20
ENST00000436443 ; ERBB4-002; intron 20
ENST00000402597 ; ERBB4-201; intron 20
Database links

Mature sequence hsa-miR-548f-3p

Accession MIMAT0005895
Sequence

59 - 

aaaaacuguaauuacuuuu

 - 77

Get sequence
Deep sequencing9577 reads, 124 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).