Stem-loop sequence hsa-mir-1305

Accession

MI0006372 (change log)

Symbol

HGNC:MIR1305

Description

Homo sapiens miR-1305 stem-loop

Gene family

MIPF0000965; mir-1305

Literature search

7 open access papers mention hsa-mir-1305
(63 sentences)

Stem-loop

   --aa               a       uu     uguu    g 
5'     gauccugcuguuucu ccauuag  uugaa    uauu u
       ||||||||||||||| |||||||  |||||    |||| a
3'     uuaggacgacagaga gguaauc  aacuu    auag a
   ccuc               g       uc     -uuc    a 

Deep sequencing

431 reads, 0 reads per million, 62 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr4: 182169293-182169378 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1305
• HGNC:MIR1305
• RNAcentral:URS000075B9BC_9606
• miRBase Tracker:MI0006372

Mature sequence hsa-miR-1305

• Accession: MIMAT0005893
• Sequence: 51 - uuuucaacucuaaugggagaga - 72
• Deep sequencing: 392 reads, 49 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000040EC3B_9606
• Predicted targets:
  • TargetMiner:hsa-miR-1305
  • TargetScanVert:hsa-miR-1305
  • miRDB:hsa-miR-1305
  • microrna.org:hsa-miR-1305

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).