Stem-loop sequence hsa-mir-1304

Accession

MI0006371

Symbol

HGNC:MIR1304

Description

Homo sapiens miR-1304 stem-loop

Gene family

MIPF0001064; mir-1304

Stem-loop

--aaa             c                        au 
     cacuugagcccag gguuugaggcuacagugagaugug  c
     ||||||||||||| ||||||||||||||||||||||||  c
     gugaacucggguc ccaagcuccgaugucacucuacac  u
acuua             c                        cg 

Deep sequencing

529 reads, 22 experiments

Genome context

• Coordinates (GRCh37.p5): chr11: 93466840-93466930 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000394652 ; TAF1D-005; exon 1

  OTTHUMT00000394653 ; TAF1D-020; exon 1

  OTTHUMT00000394654 ; TAF1D-016; intron 1

  OTTHUMT00000394658 ; TAF1D-019; intron 1

  OTTHUMT00000394652 ; TAF1D-005; exon 1

  OTTHUMT00000394653 ; TAF1D-020; exon 1

  OTTHUMT00000394654 ; TAF1D-016; intron 1

  OTTHUMT00000394658 ; TAF1D-019; intron 1

  OTTHUMT00000394652 ; TAF1D-005; exon 1

  OTTHUMT00000394653 ; TAF1D-020; exon 1

  OTTHUMT00000394654 ; TAF1D-016; intron 1

  OTTHUMT00000394658 ; TAF1D-019; intron 1

  OTTHUMT00000394650 ; TAF1D-015; intron 2

  OTTHUMT00000394789 ; TAF1D-023; intron 2

  OTTHUMT00000394659 ; TAF1D-013; intron 2

  OTTHUMT00000394660 ; TAF1D-011; intron 2

  OTTHUMT00000394650 ; TAF1D-015; intron 2

  OTTHUMT00000394789 ; TAF1D-023; intron 2

  OTTHUMT00000394659 ; TAF1D-013; intron 2

  OTTHUMT00000394660 ; TAF1D-011; intron 2

  OTTHUMT00000394650 ; TAF1D-015; intron 2

  OTTHUMT00000394789 ; TAF1D-023; intron 2

  OTTHUMT00000394659 ; TAF1D-013; intron 2

  OTTHUMT00000394660 ; TAF1D-011; intron 2

  OTTHUMT00000394651 ; TAF1D-014; intron 3

  OTTHUMT00000394651 ; TAF1D-014; intron 3

  OTTHUMT00000394651 ; TAF1D-014; intron 3

  OTTHUMT00000394664 ; TAF1D-010; intron 4

  OTTHUMT00000394664 ; TAF1D-010; intron 4

  OTTHUMT00000394664 ; TAF1D-010; intron 4

  OTTHUMT00000394657 ; TAF1D-003; intron 5

  OTTHUMT00000394657 ; TAF1D-003; intron 5

  OTTHUMT00000394657 ; TAF1D-003; intron 5

  OTTHUMT00000394649 ; TAF1D-002; intron 7

  OTTHUMT00000394647 ; TAF1D-004; intron 7

  OTTHUMT00000394649 ; TAF1D-002; intron 7

  OTTHUMT00000394647 ; TAF1D-004; intron 7

  OTTHUMT00000394649 ; TAF1D-002; intron 7

  OTTHUMT00000394647 ; TAF1D-004; intron 7

  ENST00000530769 ; TAF1D-005; exon 1

  ENST00000525928 ; TAF1D-020; exon 1

  ENST00000529435 ; TAF1D-016; intron 1

  ENST00000530089 ; TAF1D-019; intron 1

  ENST00000530769 ; TAF1D-005; exon 1

  ENST00000525928 ; TAF1D-020; exon 1

  ENST00000529435 ; TAF1D-016; intron 1

  ENST00000530089 ; TAF1D-019; intron 1

  ENST00000530769 ; TAF1D-005; exon 1

  ENST00000525928 ; TAF1D-020; exon 1

  ENST00000529435 ; TAF1D-016; intron 1

  ENST00000530089 ; TAF1D-019; intron 1

  ENST00000546088 ; TAF1D-015; intron 2

  ENST00000540232 ; TAF1D-023; intron 2

  ENST00000533794 ; TAF1D-013; intron 2

  ENST00000529794 ; TAF1D-011; intron 2

  ENST00000546088 ; TAF1D-015; intron 2

  ENST00000540232 ; TAF1D-023; intron 2

  ENST00000533794 ; TAF1D-013; intron 2

  ENST00000529794 ; TAF1D-011; intron 2

  ENST00000546088 ; TAF1D-015; intron 2

  ENST00000540232 ; TAF1D-023; intron 2

  ENST00000533794 ; TAF1D-013; intron 2

  ENST00000529794 ; TAF1D-011; intron 2

  ENST00000393259 ; TAF1D-014; intron 3

  ENST00000393259 ; TAF1D-014; intron 3

  ENST00000393259 ; TAF1D-014; intron 3

  ENST00000527068 ; TAF1D-010; intron 4

  ENST00000527068 ; TAF1D-010; intron 4

  ENST00000527068 ; TAF1D-010; intron 4

  ENST00000527169 ; TAF1D-003; intron 5

  ENST00000527169 ; TAF1D-003; intron 5

  ENST00000527169 ; TAF1D-003; intron 5

  ENST00000323981 ; TAF1D-002; intron 7

  ENST00000526015 ; TAF1D-004; intron 7

  ENST00000323981 ; TAF1D-002; intron 7

  ENST00000526015 ; TAF1D-004; intron 7

  ENST00000323981 ; TAF1D-002; intron 7

  ENST00000526015 ; TAF1D-004; intron 7

Database links

• ENTREZGENE: 100302240;MIR1304
• HGNC: 35302;MIR1304

Mature sequence hsa-miR-1304-5p

• Accession: MIMAT0005892
• Previous IDs: hsa-miR-1304
• Sequence: 20 - uuugaggcuacagugagaugug - 41
• Deep sequencing: 171 reads, 15 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1304-5p
  • MICRORNA.ORG:hsa-miR-1304-5p
  • MIRDB:hsa-miR-1304-5p
  • RNA22-HSA:hsa-miR-1304-5p
  • TARGETMINER:hsa-miR-1304-5p
  • TARGETSCAN-VERT:hsa-miR-1304

Mature sequence hsa-miR-1304-3p

• Accession: MIMAT0022720
• Sequence: 53 - ucucacuguagccucgaacccc - 74
• Deep sequencing: 325 reads, 13 experiments
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1304-3p
  • MIRDB:hsa-miR-1304-3p
  • TARGETMINER:hsa-miR-1304-3p

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).