Stem-loop sequence hsa-mir-1287

Accession MI0006349
Symbol HGNC:MIR1287
Description Homo sapiens miR-1287 stem-loop
Gene family MIPF0000725; mir-1287
Stem-loop 
--  ug  cug     gu    g   a      c    cu a  cuu 
  gu  ug   uccag  gcug auc gugguu gagu  g gc   u
  ||  ||   |||||  |||| ||| |||||| ||||  | ||    
  ca  ac   agguu  ugac uag caccga cuca  c cg   a
aa  gu  -cg     ag    g   a      u    -- -  aaa
Get sequence
Deep sequencing
716 reads, 21 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr10: 100154975-100155064 [-]
sense
OTTHUMT00000049782 ; PYROXD2-001; exon 8
OTTHUMT00000049783 ; PYROXD2-002; exon 8
OTTHUMT00000049782 ; PYROXD2-001; exon 8
OTTHUMT00000049783 ; PYROXD2-002; exon 8
OTTHUMT00000049782 ; PYROXD2-001; exon 8
OTTHUMT00000049783 ; PYROXD2-002; exon 8
ENST00000370575 ; PYROXD2-001; exon 8
ENST00000483923 ; PYROXD2-002; exon 8
ENST00000370575 ; PYROXD2-001; exon 8
ENST00000483923 ; PYROXD2-002; exon 8
ENST00000370575 ; PYROXD2-001; exon 8
ENST00000483923 ; PYROXD2-002; exon 8
Database links

Mature sequence hsa-miR-1287

Accession MIMAT0005878
Sequence

16 -  

ugcuggaucagugguucgaguc

 - 37

Get sequence
Deep sequencing 698 reads, 18 experiments
Evidence experimental; Solexa [1], 454 [2]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).
2
PMID:19508715 "Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing" Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, Tolstrup N, Moller S, Krogh A, Litman T BMC Med Genomics. 2:35(2009).