Stem-loop sequence hsa-mir-548e

Accession MI0006344
Symbol HGNC:MIR548E
Description Homo sapiens miR-548e stem-loop
Gene family MIPF0000317; mir-548
Stem-loop 
--             a      caa  g           a   c 
  uuauuagguuggu caaaag   uc cgguuuuugcu uua u
  ||||||||||||| ||||||   || ||||||||||| |||  
  gauaguccaacca guuuuc   ag gucaaaaacgg aau u
aa             c      auc  a           a   u
Get sequence
Deep sequencing
328 reads, 21 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr10: 112748684-112748771 [+]
sense
OTTHUMT00000050357 ; SHOC2-003; intron 1
OTTHUMT00000050356 ; SHOC2-002; intron 1
OTTHUMT00000050357 ; SHOC2-003; intron 1
OTTHUMT00000050356 ; SHOC2-002; intron 1
OTTHUMT00000050357 ; SHOC2-003; intron 1
OTTHUMT00000050356 ; SHOC2-002; intron 1
OTTHUMT00000050355 ; SHOC2-001; intron 3
OTTHUMT00000050355 ; SHOC2-001; intron 3
OTTHUMT00000050355 ; SHOC2-001; intron 3
ENST00000489390 ; SHOC2-003; intron 1
ENST00000451838 ; SHOC2-002; intron 1
ENST00000489390 ; SHOC2-003; intron 1
ENST00000451838 ; SHOC2-002; intron 1
ENST00000489390 ; SHOC2-003; intron 1
ENST00000451838 ; SHOC2-002; intron 1
ENST00000265277 ; SHOC2-201; intron 2
ENST00000265277 ; SHOC2-201; intron 2
ENST00000265277 ; SHOC2-201; intron 2
ENST00000369452 ; SHOC2-001; intron 3
ENST00000369452 ; SHOC2-001; intron 3
ENST00000369452 ; SHOC2-001; intron 3
Database links

Mature sequence hsa-miR-548e

Accession MIMAT0005874
Sequence

53 -  

aaaaacugagacuacuuuugca

 - 74

Get sequence
Deep sequencing 311 reads, 21 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).