Stem-loop sequence hsa-mir-663b

Accession

MI0006336

Symbol

HGNC:MIR663B

Description

Homo sapiens miR-663b stem-loop

Gene family

MIPF0000462; mir-663

Stem-loop

ggu   ga    -  u    - auc     cg  --uc  ug   uacc    u  u  c 
   gcc  gggc cg ccgg c   cuagg  gg    gc  cgg    uccc cc gu u
   |||  |||| || |||| |   |||||  ||    ||  |||    |||| || || g
   ugg  uccg gc ggcc g   ggucc  uu    cg  gcc    aggg gg cg u
cuu   ag    u  c    c -gu     uu  gugc  gu   --cu    u  -  g 

Deep sequencing

23 reads, 8 experiments

Genome context

• Coordinates (GRCh37.p5): chr2: 133014539-133014653 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000331354 ; NCRNA00164-002; intron 1

  OTTHUMT00000331354 ; NCRNA00164-002; intron 1

  OTTHUMT00000331354 ; NCRNA00164-002; intron 1

  ENST00000470729 ; ANKRD30BL-002; intron 1

  ENST00000470729 ; ANKRD30BL-002; intron 1

  ENST00000470729 ; ANKRD30BL-002; intron 1

Database links

• ENTREZGENE: 100302269;MIR663B
• HGNC: 35270;MIR663B

Mature sequence hsa-miR-663b

• Accession: MIMAT0005867
• Sequence: 90 - gguggcccggccgugccugagg - 111
• Deep sequencing: 5 reads, 3 experiments
• Evidence: experimental; miRAP [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-663b
  • MICRORNA.ORG:hsa-miR-663b
  • MIRDB:hsa-miR-663b
  • RNA22-HSA:hsa-miR-663b
  • TARGETMINER:hsa-miR-663b
  • TARGETSCAN-VERT:hsa-miR-663b

References

1. PMID:17989710 "MicroRNA expression profiles of human leukemias" Takada S, Yamashita Y, Berezikov E, Hatanaka H, Fujiwara SI, Kurashina K, Watanabe H, Enomoto M, Soda M, Choi YL, Mano H Leukemia. 22:1274-1278(2008).