Stem-loop sequence hsa-mir-1200

Accession

MI0006332

Symbol

HGNC:MIR1200

Description

Homo sapiens miR-1200 stem-loop

Gene family

MIPF0001036; mir-1200

Stem-loop

u    cu  u     -gcca         uc    a   g 
 gcua  uc ccuga     uucugagcc  aauc cuu c
 ||||  || |||||     |||||||||  |||| |||  
 cgau  ag ggacu     aggacuugg  uuag gag c
c    --  -     guuua         --    a   a 

Genome context

• Coordinates (GRCh37.p5): chr7: 36958962-36959037 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000219863 ; ELMO1-002; intron 1

  OTTHUMT00000337935 ; ELMO1-019; intron 1

  OTTHUMT00000337934 ; ELMO1-018; intron 1

  OTTHUMT00000337932 ; ELMO1-016; intron 1

  OTTHUMT00000219863 ; ELMO1-002; intron 1

  OTTHUMT00000337935 ; ELMO1-019; intron 1

  OTTHUMT00000337934 ; ELMO1-018; intron 1

  OTTHUMT00000337932 ; ELMO1-016; intron 1

  OTTHUMT00000219863 ; ELMO1-002; intron 1

  OTTHUMT00000337935 ; ELMO1-019; intron 1

  OTTHUMT00000337934 ; ELMO1-018; intron 1

  OTTHUMT00000337932 ; ELMO1-016; intron 1

  OTTHUMT00000337937 ; ELMO1-021; intron 4

  OTTHUMT00000337937 ; ELMO1-021; intron 4

  OTTHUMT00000337937 ; ELMO1-021; intron 4

  OTTHUMT00000337931 ; ELMO1-015; intron 7

  OTTHUMT00000337931 ; ELMO1-015; intron 7

  OTTHUMT00000337931 ; ELMO1-015; intron 7

  OTTHUMT00000219830 ; ELMO1-001; intron 16

  OTTHUMT00000337924 ; ELMO1-008; intron 16

  OTTHUMT00000337919 ; ELMO1-003; intron 16

  OTTHUMT00000219830 ; ELMO1-001; intron 16

  OTTHUMT00000337924 ; ELMO1-008; intron 16

  OTTHUMT00000337919 ; ELMO1-003; intron 16

  OTTHUMT00000219830 ; ELMO1-001; intron 16

  OTTHUMT00000337924 ; ELMO1-008; intron 16

  OTTHUMT00000337919 ; ELMO1-003; intron 16

  ENST00000396045 ; ELMO1-002; intron 1

  ENST00000396040 ; ELMO1-019; intron 1

  ENST00000487843 ; ELMO1-018; intron 1

  ENST00000464262 ; ELMO1-016; intron 1

  ENST00000396045 ; ELMO1-002; intron 1

  ENST00000396040 ; ELMO1-019; intron 1

  ENST00000487843 ; ELMO1-018; intron 1

  ENST00000464262 ; ELMO1-016; intron 1

  ENST00000396045 ; ELMO1-002; intron 1

  ENST00000396040 ; ELMO1-019; intron 1

  ENST00000487843 ; ELMO1-018; intron 1

  ENST00000464262 ; ELMO1-016; intron 1

  ENST00000472359 ; ELMO1-021; intron 4

  ENST00000341056 ; ELMO1-201; intron 4

  ENST00000472359 ; ELMO1-021; intron 4

  ENST00000341056 ; ELMO1-201; intron 4

  ENST00000472359 ; ELMO1-021; intron 4

  ENST00000341056 ; ELMO1-201; intron 4

  ENST00000420636 ; ELMO1-015; intron 7

  ENST00000420636 ; ELMO1-015; intron 7

  ENST00000420636 ; ELMO1-015; intron 7

  ENST00000361912 ; ELMO1-202; intron 13

  ENST00000361912 ; ELMO1-202; intron 13

  ENST00000310758 ; ELMO1-001; intron 16

  ENST00000442504 ; ELMO1-008; intron 16

  ENST00000448602 ; ELMO1-003; intron 16

  ENST00000310758 ; ELMO1-001; intron 16

  ENST00000442504 ; ELMO1-008; intron 16

  ENST00000448602 ; ELMO1-003; intron 16

  ENST00000310758 ; ELMO1-001; intron 16

  ENST00000442504 ; ELMO1-008; intron 16

  ENST00000448602 ; ELMO1-003; intron 16

Database links

• ENTREZGENE: 100302113;MIR1200
• HGNC: 35266;MIR1200

Mature sequence hsa-miR-1200

• Accession: MIMAT0005863
• Sequence: 9 - cuccugagccauucugagccuc - 30
• Evidence: experimental; cloned [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1200
  • MICRORNA.ORG:hsa-miR-1200
  • MIRDB:hsa-miR-1200
  • RNA22-HSA:hsa-miR-1200
  • TARGETMINER:hsa-miR-1200
  • TARGETSCAN-VERT:hsa-miR-1200

References

1. PMID:17989717 "Small RNAs analysis in CLL reveals a deregulation of miRNA expression and novel miRNA candidates of putative relevance in CLL pathogenesis" Marton S, Garcia MR, Robello C, Persson H, Trajtenberg F, Pritsch O, Rovira C, Naya H, Dighiero G, Cayota A Leukemia. 22:330-338(2008).