Stem-loop sequence hsa-mir-1237

Accession

MI0006327

Symbol

HGNC:MIR1237

Description

Homo sapiens miR-1237 stem-loop

Gene family

MIPF0000585; mir-1237

Stem-loop

gugggagggcccaggcgcgggcagggguggggguggcagagcgcuguccc           c    ----c      
                                                  gggggcggggc gaag     gcggc 
                                                  ||||||||||| ||||     |||| g
                                                  ccccugccucg cuuc     ugcca 
-----------------------------------------------gac           u    cucaa      

Deep sequencing

33 reads, 17 experiments

Genome context

• Coordinates (GRCh37.p5): chr11: 64136074-64136175 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000385364 ; RPS6KA4-002; intron 11

  OTTHUMT00000106246 ; RPS6KA4-001; intron 11

  OTTHUMT00000385368 ; RPS6KA4-005; intron 11

  OTTHUMT00000385369 ; RPS6KA4-003; intron 11

  OTTHUMT00000385364 ; RPS6KA4-002; intron 11

  OTTHUMT00000106246 ; RPS6KA4-001; intron 11

  OTTHUMT00000385368 ; RPS6KA4-005; intron 11

  OTTHUMT00000385369 ; RPS6KA4-003; intron 11

  OTTHUMT00000385364 ; RPS6KA4-002; intron 11

  OTTHUMT00000106246 ; RPS6KA4-001; intron 11

  OTTHUMT00000385368 ; RPS6KA4-005; intron 11

  OTTHUMT00000385369 ; RPS6KA4-003; intron 11

  ENST00000294261 ; RPS6KA4-201; intron 10

  ENST00000294261 ; RPS6KA4-201; intron 10

  ENST00000294261 ; RPS6KA4-201; intron 10

  ENST00000528057 ; RPS6KA4-002; intron 11

  ENST00000334205 ; RPS6KA4-001; intron 11

  ENST00000528355 ; RPS6KA4-005; intron 11

  ENST00000530504 ; RPS6KA4-003; intron 11

  ENST00000528057 ; RPS6KA4-002; intron 11

  ENST00000334205 ; RPS6KA4-001; intron 11

  ENST00000528355 ; RPS6KA4-005; intron 11

  ENST00000530504 ; RPS6KA4-003; intron 11

  ENST00000528057 ; RPS6KA4-002; intron 11

  ENST00000334205 ; RPS6KA4-001; intron 11

  ENST00000528355 ; RPS6KA4-005; intron 11

  ENST00000530504 ; RPS6KA4-003; intron 11

Database links

• ENTREZGENE: 100302280;MIR1237
• HGNC: 33927;MIR1237

Mature sequence hsa-miR-1237-5p

• Accession: MIMAT0022946
• Sequence: 50 - cgggggcggggccgaagcgcg - 70
• Deep sequencing: 23 reads, 13 experiments
• Evidence: not experimental

Mature sequence hsa-miR-1237-3p

• Accession: MIMAT0005592
• Previous IDs: hsa-miR-1237
• Sequence: 82 - uccuucugcuccgucccccag - 102
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; cloned [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1237-3p
  • MICRORNA.ORG:hsa-miR-1237-3p
  • MIRDB:hsa-miR-1237-3p
  • RNA22-HSA:hsa-miR-1237-3p
  • TARGETSCAN-VERT:hsa-miR-1237

References

1. PMID:17964270 "Mammalian mirtron genes" Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC Mol Cell. 28:328-336(2007).