Stem-loop sequence hsa-mir-1231

Accession

MI0006321

Symbol

HGNC:MIR1231

Description

Homo sapiens miR-1231 stem-loop

Gene family

MIPF0001309; mir-1231

Stem-loop

gucagugu   -   --      cu     aa    ---a    ---ca    u 
        cug ggc  ggacag  gcagg  aggg    agac     aggc u
        ||| |||  ||||||  |||||  ||||    ||||     |||| g
        gac ccg  cuuguc  ugucc  uccc    ucug     ucug c
--------   a   uu      --     ca    accg    accug    u 

Genome context

• Coordinates (GRCh37.p5): chr1: 201777739-201777830 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000087014 ; NAV1-002; intron 16

  OTTHUMT00000087014 ; NAV1-002; intron 16

  OTTHUMT00000087014 ; NAV1-002; intron 16

  OTTHUMT00000087013 ; NAV1-001; intron 19

  OTTHUMT00000087018 ; NAV1-006; intron 19

  OTTHUMT00000087013 ; NAV1-001; intron 19

  OTTHUMT00000087018 ; NAV1-006; intron 19

  OTTHUMT00000087013 ; NAV1-001; intron 19

  OTTHUMT00000087018 ; NAV1-006; intron 19

  ENST00000367295 ; NAV1-002; intron 16

  ENST00000367301 ; NAV1-204; intron 16

  ENST00000367295 ; NAV1-002; intron 16

  ENST00000367301 ; NAV1-204; intron 16

  ENST00000367295 ; NAV1-002; intron 16

  ENST00000367300 ; NAV1-203; intron 17

  ENST00000367300 ; NAV1-203; intron 17

  ENST00000367300 ; NAV1-203; intron 17

  ENST00000295624 ; NAV1-201; intron 18

  ENST00000367297 ; NAV1-202; intron 18

  ENST00000391966 ; NAV1-205; intron 18

  ENST00000295624 ; NAV1-201; intron 18

  ENST00000367297 ; NAV1-202; intron 18

  ENST00000391966 ; NAV1-205; intron 18

  ENST00000295624 ; NAV1-201; intron 18

  ENST00000367297 ; NAV1-202; intron 18

  ENST00000367296 ; NAV1-001; intron 19

  ENST00000367302 ; NAV1-006; intron 19

  ENST00000367302 ; NAV1-006; intron 19

  ENST00000367296 ; NAV1-001; intron 19

  ENST00000367302 ; NAV1-006; intron 19

  ENST00000367296 ; NAV1-001; intron 19

  antisense

  OTTHUMT00000087101 ; RP11-90L20.3-001; intron 2

  OTTHUMT00000087101 ; RP11-90L20.3-001; intron 2

  OTTHUMT00000087101 ; RP11-90L20.3-001; intron 2

  ENST00000413035 ; RP11-90L20.3-001; intron 2

  ENST00000413035 ; IPO9-AS1-001; intron 2

  ENST00000413035 ; IPO9-AS1-001; intron 2

Database links

• ENTREZGENE: 100302158;MIR1231
• HGNC: 33921;MIR1231

Mature sequence hsa-miR-1231

• Accession: MIMAT0005586
• Sequence: 5 - gugucugggcggacagcugc - 24
• Evidence: experimental; cloned [1]
• Validated targets:
  • TARBASE:hsa-miR-1231
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1231
  • MICRORNA.ORG:hsa-miR-1231
  • MIRDB:hsa-miR-1231
  • RNA22-HSA:hsa-miR-1231
  • TARGETMINER:hsa-miR-1231
  • TARGETSCAN-VERT:hsa-miR-1231

References

1. PMID:17964270 "Mammalian mirtron genes" Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC Mol Cell. 28:328-336(2007).