Stem-loop sequence hsa-mir-1227

Accession

MI0006316

Symbol

HGNC:MIR1227

Description

Homo sapiens miR-1227 stem-loop

Gene family

MIPF0000454; mir-1227

Stem-loop

guggggccaggcgguggugggcacugcug      g   agcagccaugcaga 
                             gggugg cac              g
                             |||||| |||               
                             cccacc gug              c
-------------------gaccccuuuu      -   ccccaguuuacggg 

Deep sequencing

1 reads, 1 experiments

Genome context

• Coordinates (GRCh37.p5): chr19: 2234061-2234148 [-]
• Overlapping transcripts:

  sense

  ENST00000326631 ; PLEKHJ1-201; intron 4

  ENST00000326631 ; PLEKHJ1-201; intron 4

  ENST00000326631 ; PLEKHJ1-201; intron 4

Database links

• ENTREZGENE: 100302283;MIR1227
• HGNC: 33932;MIR1227

Mature sequence hsa-miR-1227-5p

• Accession: MIMAT0022941
• Sequence: 1 - guggggccaggcggugg - 17
• Deep sequencing: 1 reads, 1 experiments
• Evidence: not experimental

Mature sequence hsa-miR-1227-3p

• Accession: MIMAT0005580
• Previous IDs: hsa-miR-1227
• Sequence: 69 - cgugccacccuuuuccccag - 88
• Evidence: experimental; cloned [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1227-3p
  • MICRORNA.ORG:hsa-miR-1227-3p
  • MIRDB:hsa-miR-1227-3p
  • RNA22-HSA:hsa-miR-1227-3p
  • TARGETSCAN-VERT:hsa-miR-1227

References

1. PMID:17964270 "Mammalian mirtron genes" Berezikov E, Chung WJ, Willis J, Cuppen E, Lai EC Mol Cell. 28:328-336(2007).