Stem-loop sequence mmu-mir-1199

Accession MI0006307
Symbol MGI:Mir1199
Description Mus musculus miR-1199 stem-loop
Stem-loop 
----------------agccu cg           -- u     uc           g   agga      
                     g  ccggagccggg  g cugag  ccggucgcgcg gcg    acuca 
                     |  |||||||||||  | |||||  ||||||||||| |||    |||| u
                     c  ggccucggccc  c gacuc  ggccggcgugc cgu    ugagu 
aggucccgcgcgccgucgccu au           gg u     gu           g   ----
Get sequence
Deep sequencing
68 reads, 27 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr8: 84011515-84011633 [-]
intergenic
Database links

Mature sequence mmu-miR-1199-5p

Accession MIMAT0005860
Previous IDs mmu-miR-1199
Sequence

21 -  

ucugagucccggucgcgcgg

 - 40

Get sequence
Deep sequencing 59 reads, 23 experiments
Evidence experimental; 454 [1], Solexa [2]
Predicted targets

Mature sequence mmu-miR-1199-3p

Accession MIMAT0017333
Previous IDs mmu-miR-1199*
Sequence

65 -  

ugcggccggugcucagucggc

 - 85

Get sequence
Deep sequencing 6 reads, 6 experiments
Evidence experimental; Solexa [2]
Predicted targets

References

1
PMID:17989215 "RNA sequence analysis defines Dicer's role in mouse embryonic stem cells" Calabrese JM, Seila AC, Yeo GW, Sharp PA Proc Natl Acad Sci U S A. 104:18097-18102(2007).
2
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).