Stem-loop sequence mmu-mir-582

Accession MI0006127
Symbol MGI:Mir582
Description Mus musculus miR-582 stem-loop
Gene family MIPF0000417; mir-582
Stem-loop 
-----         aua            ca     uaaucu 
     acucuuugg   caguuguucaac  guuac      a
     |||||||||   ||||||||||||  |||||       
     ugggaaacc   gucaacaaguug  caaug      a
aaacg         caa            uc     uuaauc
Get sequence
Deep sequencing
7035 reads, 77 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr13: 109324744-109324824 [+]
sense
OTTMUST00000080695 ; Pde4d-005; intron 1
OTTMUST00000080693 ; Pde4d-003; intron 1
OTTMUST00000080694 ; Pde4d-004; intron 1
OTTMUST00000080696 ; Pde4d-006; intron 1
OTTMUST00000079296 ; Pde4d-001; intron 3
ENSMUST00000153234 ; Pde4d-005; intron 1
ENSMUST00000120671 ; Pde4d-003; intron 1
ENSMUST00000138938 ; Pde4d-004; intron 1
ENSMUST00000129374 ; Pde4d-006; intron 1
ENSMUST00000177907 ; Pde4d-201; intron 2
ENSMUST00000122041 ; Pde4d-001; intron 3
Database links

Mature sequence mmu-miR-582-5p

Accession MIMAT0005291
Sequence

10 -  

auacaguuguucaaccaguuac

 - 31

Get sequence
Deep sequencing 5087 reads, 56 experiments
Evidence experimental; cloned [1], Solexa [2-3]
Predicted targets

Mature sequence mmu-miR-582-3p

Accession MIMAT0005292
Sequence

47 -  

uaaccuguugaacaacugaac

 - 67

Get sequence
Deep sequencing 989 reads, 53 experiments
Evidence experimental; cloned [1], Solexa [2-3]
Predicted targets

References

1
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
2
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
3
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).