Stem-loop sequence ppt-MIR1063h

Accession MI0006029
Description Physcomitrella patens miR1063h stem-loop
Gene family MIPF0000381; MIR1063
Stem-loop 
aagaacggcaaa  u          cu   a        uacu         ga c   -    c   cacu  -     ---uu      ---  c     accauuugaauuuggg 
            gg ccgucgucca  uac ucuuggag    gcaucuuca  u ugu ugca guu    gc cuguu     accagc   cu cauga                c
            || ||||||||||  ||| ||||||||    |||||||||  | ||| |||| |||    || |||||     ||||||   || |||||                 
            cc ggcagcgggu  gug agagccuc    cguagaagu  a aca gcgu caa    cg gacaa     uggucg   ga guacu                u
-cgcgaucuaca  u          ac   a        uuuu         ag a   u    c   --au  c     uaguu      uaa  a     aagggaggcaaucucu
Get sequence
Deep sequencing
297 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_75: 1216009-1216235 [+]
intergenic

Mature sequence ppt-miR1063h

Accession MIMAT0005189
Sequence

30 -  

caucuuggaguacugcaucuu

 - 50

Get sequence
Deep sequencing 295 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).