Stem-loop sequence ppt-MIR1062

Accession MI0006021
Description Physcomitrella patens miR1062 stem-loop
Stem-loop 
cga   -c  uu   a       g          uc   u          -  uaggaugucgggaggggucgauguguuguggaauguuccg 
   guu  gc  ugc cgggguu uugucguccc  acg gguguuugca gc                                        c
   |||  ||  ||| ||||||| ||||||||||  ||| |||||||||| ||                                        u
   caa  cg  gug gucucga agcagcaggg  ugc ccacaaacgu cg                                        c
cua   cu  uu   -       -          ua   -          u  ccggagugaccgucugccauucccagugaguuuaaaguuc
Get sequence
Deep sequencing
22 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_49: 1228135-1228318 [-]
intergenic

Mature sequence ppt-miR1062

Accession MIMAT0005181
Sequence

30 -  

ucccucacgugguguuugcagc

 - 51

Get sequence
Deep sequencing 15 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).