Stem-loop sequence ppt-MIR1045

Accession MI0006004
Description Physcomitrella patens miR1045 stem-loop
Stem-loop 
gaag     ---aug   gca    c  ca           cuu              a   aa    --     g 
    cgaua      ggu   cccu aa  cgaagugcugg   uuugacguuuugcu cua  ugaa  uaacc u
    |||||      |||   |||| ||  |||||||||||   |||||||||||||| |||  ||||  ||||| g
    gcuau      uca   ggga uu  gcuucacgacc   aaacugcagaacga gau  acuu  auugg c
---g     guguga   -ac    c  cc           aac              c   -c    aa     a
Get sequence
Deep sequencing
122 reads, 2 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_128: 563490-563634 [-]
intergenic

Mature sequence ppt-miR1045

Accession MIMAT0005158
Sequence

30 -  

aagugcuggcuuuuugacguu

 - 50

Get sequence
Deep sequencing 91 reads, 2 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).