Stem-loop sequence ppt-MIR1035

Accession MI0005994
Description Physcomitrella patens miR1035 stem-loop
Stem-loop 
------g  ucu   a  gaagaag           g       c          auu        u uuu      guguauucauauggca 
       gg   gaa gc       uuuuucaaacc ucuuagc cacaaaacga   guugugau g   gagauc                g
       ||   ||| ||       ||||||||||| ||||||| ||||||||||   |||||||| |   ||||||                 
       cc   cuu ug       aagaaguuugg agaaucg guguuuugcu   uagcacug c   cucuag                c
uguugua  --u   a  -----ag           a       a          ---        u --u      acacugucgaacguuc
Get sequence
Deep sequencing
147 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_217: 384203-384372 [+]
intergenic

Mature sequence ppt-miR1035

Accession MIMAT0005142
Sequence

30 -  

cgucuuagcccacaaaacgaa

 - 50

Get sequence
Deep sequencing 105 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).