Stem-loop sequence ppt-MIR1028a

Accession MI0005971
Description Physcomitrella patens miR1028a stem-loop
Stem-loop 
acccgauuuacc     au   u   a  u u                 a    cacau     g aacgaaucuggcaguaagacuucauuuauauggguccauuccgcuccaagcuuuc 
            uucac  cug ucc gc c uagaucuacaaugucac ugaa     acuug u                                                       a
            |||||  ||| ||| || | ||||||||||||||||| ||||     ||||| |                                                        
            aagug  gau agg cg g aucuagauguuacagug acuu     ugaac a                                                       c
-uugaacuccga     gu   u   c  u c                 c    ----u     g agucaacguagugguugccagucuaaaagugauauaacgauuuagacagugucua
Get sequence
Deep sequencing
1074 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_167: 878809-879047 [+]
intergenic

Mature sequence ppt-miR1028a-5p

Accession MIMAT0005116
Sequence

30 -  

ucuuagaucuacaaugucaca

 - 50

Get sequence
Deep sequencing 875 reads, 3 experiments
Evidence experimental; 454 [1]

Mature sequence ppt-miR1028a-3p

Accession MIMAT0005117
Sequence

193 -  

ugacauuguagaucuacgugc

 - 213

Get sequence
Deep sequencing 199 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).