Stem-loop sequence ppt-MIR1026a

Accession MI0005967
Description Physcomitrella patens miR1026a stem-loop
Gene family MIPF0000413; MIR1026
Stem-loop 
-    aaguucuug     c   cu         a   a           ac    a   ua  c  -      ug auga     uu 
 auga         agaca ucu  aggucugag aag cuugagaggac  uccu caa  gc uc gggaac  c    cguuu  c
 ||||         ||||| |||  ||||||||| ||| |||||||||||  |||| |||  || || ||||||  |    |||||   
 uacu         uuugu agg  uucaggcuc uuc gaacuuucuug  agga guu  cg ag cccuug  g    guaga  a
g    -auaccuug     u   -u         c   c           ac    c   ua  -  u      gu --ga     uu
Get sequence
Deep sequencing
228 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_275: 115212-115382 [-]
intergenic

Mature sequence ppt-miR1026a

Accession MIMAT0005112
Sequence

30 -  

ugagaaagacuugagaggaca

 - 50

Get sequence
Deep sequencing 228 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).