Stem-loop sequence ppt-MIR537d

Accession MI0005936
Description Physcomitrella patens miR537d stem-loop
Gene family MIPF0000207; MIR537
Stem-loop 
uugaacaau       -u    ca   a              g   c       c  u   uu     aac     uuu    aaa      ga 
         gucauua  caua  uag cuguagaaacaccu aag uauugau uc acu  guugu   cgauc   augg   gugcac  a
         |||||||  ||||  ||| |||||||||||||| ||| ||||||| || |||  |||||   |||||   ||||   ||||||   
         uaguagu  guau  auc gacaucuuugugga uuc augacua ag ugg  uagca   gcuag   uguc   uaugug  a
--auucuau       uc    uc   g              g   a       c  -   -u     --c     ---    --g      ua
Get sequence
Deep sequencing
2329 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_2: 4065022-4065199 [-]
intergenic

Mature sequence ppt-miR537d

Accession MIMAT0005068
Sequence

136 -  

uugagguguuucuacaggcua

 - 156

Get sequence
Deep sequencing 1937 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).