Stem-loop sequence ppt-MIR537c

Accession MI0005935
Description Physcomitrella patens miR537c stem-loop
Gene family MIPF0000207; MIR537
Stem-loop
      c   a              g   u ac       a  -       ----aggua  a     a      c 
ucauau ugg cuguagaaacaccu aag g  ugaaguu gu ccgguuu         ug gaaug uuggag a
|||||| ||| |||||||||||||| ||| |  ||||||| || |||||||         || ||||| |||||| c
aguaua auc gacaucuuugugga uuc c  acuucga cg ggccaaa         ac cuugu gaccuc c
      c   g              g   u ga       a  u       guaauguag  -     a      u 
Get sequence
Deep sequencing
2719 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_1: 3555321-3555469 [+]
intergenic

Mature sequence ppt-miR537c

Accession MIMAT0005067
Sequence

122 - 

uugagguguuucuacaggcua

 - 142

Get sequence
Deep sequencing 2326 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).