Stem-loop sequence ppt-MIR533e

Accession MI0005930
Description Physcomitrella patens miR533e stem-loop
Gene family MIPF0000356; MIR533
Stem-loop 
---ga       ugcau  c    c  c    ga        gc              uggagcgaauuuagcuugugc 
     gugguug     ga gagg ag gaca  gagagcug  cagacugugaggga                     c
     |||||||     || |||| || ||||  ||||||||  ||||||||||||||                      
     caccggc     uu cucc uc cugu  cucucggu  gucugacacucccu                     u
gguug       ----u  u    u  u    gc        ac              cgacgugcucacucggugugu
Get sequence
Deep sequencing
411 reads, 3 experiments
Genome context
Coordinates (JGI1.1) Overlapping transcripts
scaffold_224: 413758-413910 [+]
intergenic

Mature sequence ppt-miR533e

Accession MIMAT0005063
Sequence

103 -  

cucacagucugcauggcucuc

 - 123

Get sequence
Deep sequencing 116 reads, 2 experiments
Evidence experimental; 454 [1]

References

1
PMID:17601824 "Common functions for diverse small RNAs of land plants" Axtell MJ, Snyder JA, Bartel DP Plant Cell. 19:1750-1769(2007).