Stem-loop sequence mdv2-mir-M17

Accession MI0005885
Description Mareks disease virus type 2 miR-M17 stem-loop
Stem-loop 
---------      a    u      gucc       gug 
         ucgucc gucc ucccgg    ccuagag   u
         |||||| |||| ||||||    |||||||    
         agcggg cagg agggcc    ggaucuu   c
agcgcgcgc      a    c      aaca       gca
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Mature sequence mdv2-miR-M17-5p

Accession MIMAT0004456
Previous IDs mdv2-miR-M17*
Sequence

7 -  

aguccuucccggguccccuaga

 - 28

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Evidence experimental; cloned [1], Solexa [2]

Mature sequence mdv2-miR-M17-3p

Accession MIMAT0004457
Previous IDs mdv2-miR-M17
Sequence

41 -  

uaggacaaccgggacggacagg

 - 62

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Evidence experimental; cloned [1], Solexa [2]

References

1
PMID:17459919 "Marek's disease virus type 2 (MDV-2)-encoded microRNAs show no sequence conservation with those encoded by MDV-1" Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Sewer A, Zavolan M, Nair V J Virol. 81:7164-7170(2007).
2
PMID:19328516 "MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific" Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J Virology. 388:128-136(2009).