Stem-loop sequence dme-mir-1017

Accession MI0005878
Description Drosophila melanogaster miR-1017 stem-loop
Stem-loop 
-----        -a         aaagcuucccauc 
     gugaguuu  guggaguuu             g
     ||||||||  |||||||||             c
     uacucaaa  caucucgaa             c
ccccc        cc         agcgcauuaacga
Get sequence
Deep sequencing
8126 reads, 34 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
3R: 20314334-20314404 [+]
sense
FBtr0304259 ; mir-1017-RM; exon 1
FBtr0304259 ; mir-1017-RM; exon 1
FBtr0084639 ; nAcRalpha-96Ab-RA; intron 4
FBtr0084639 ; nAcRalpha-96Ab-RA; intron 4
FBtr0084639 ; nAcRalpha-96Ab-RA; intron 4
FBtr0084640 ; nAcRalpha-96Ab-RB; intron 5
FBtr0084640 ; nAcRalpha-96Ab-RB; intron 5
FBtr0084640 ; nAcRalpha-96Ab-RB; intron 5

Mature sequence dme-miR-1017-3p

Accession MIMAT0005030
Previous IDs dme-miR-1017
Sequence

46 -  

gaaagcucuacccaaacucaucc

 - 68

Get sequence
Deep sequencing 8099 reads, 34 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:17589500 "Intronic microRNA precursors that bypass Drosha processing" Ruby JG, Jan CH, Bartel DP Nature. 448:83-86(2007).