Stem-loop sequence dme-mir-993

Accession MI0005854
Description Drosophila melanogaster miR-993 stem-loop
Gene family MIPF0000698; mir-993
Stem-loop 
aacg  -   -    cc    c     uuc          ----uuuaaa    -       a 
    cu ccc guga  uacc uguag   cgggcuuuug          uggc guucggc c
    || ||| ||||  |||| |||||   ||||||||||          |||| ||||||| a
    ga ggg cacu  augg acauc   gcucgaagac          gucg caggcug u
--aa  u   a    cu    -     ucu          uauuagcucg    u       u
Get sequence
Deep sequencing
15725 reads, 41 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
3R: 2602055-2602173 [+]
sense
FBtr0303008 ; CR42721-RA; intron 1
FBtr0303008 ; CR42721-RA; intron 1

Mature sequence dme-miR-993-5p

Accession MIMAT0020893
Sequence

16 -  

uacccuguaguuccgggcuuuug

 - 38

Get sequence
Deep sequencing 735 reads, 33 experiments
Evidence not experimental
Predicted targets

Mature sequence dme-miR-993-3p

Accession MIMAT0005512
Previous IDs dme-miR-993
Sequence

85 -  

gaagcucgucucuacagguaucu

 - 107

Get sequence
Deep sequencing 14990 reads, 40 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).