Stem-loop sequence dme-mir-987

Accession MI0005846
Description Drosophila melanogaster miR-987 stem-loop
Gene family MIPF0000859; mir-987
Stem-loop 
-  - ug      gu  a        a     gau       ag  gc 
 ug u  gacugu  uu aaguaaau gucug   ugaugaa  uu  a
 || |  ||||||  || |||||||| |||||   |||||||  ||  u
 ac a  uugacg  aa uucauuua cggac   acuacuu  ga  u
a  a gu      uc  c        -     --a       aa  gc
Get sequence
Deep sequencing
32391 reads, 41 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2R: 5200528-5200621 [-]
intergenic

Mature sequence dme-miR-987-5p

Accession MIMAT0005504
Previous IDs dme-miR-987
Sequence

15 -  

uaaaguaaauagucuggauugaug

 - 38

Get sequence
Deep sequencing 32157 reads, 41 experiments
Evidence experimental; 454 [1-2], Solexa [2]
Predicted targets

Mature sequence dme-miR-987-3p

Accession MIMAT0020885
Sequence

59 -  

aucaacaggcauuuacuuca

 - 78

Get sequence
Deep sequencing 226 reads, 18 experiments
Evidence not experimental
Predicted targets

References

1
PMID:17989254 "Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs" Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC Genome Res. 17:1850-1864(2007).
2
PMID:17989255 "Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes" Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M Genome Res. 17:1865-1879(2007).